BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H11LP1|AL427545
(1073 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1631 1375 0.0
3x_Contig1352 395 e-109
>3x_Contig1631
Length = 12284
Score = 1375 bits (693), Expect = 0.0
Identities = 757/771 (98%), Gaps = 6/771 (0%)
Strand = Plus / Minus
Query: 304 tcattccgatggtgactcaaaactacttgccgaagg-tgaaacattgttcacagatgatt 362
||||||||| ||||||||||||||||| |||||||| |||||| |||||||||| | ||
Sbjct: 12134 tcattccga-ggtgactcaaaactactggccgaagggtgaaac-ttgttcacagtttttt 12077
Query: 363 tattaagtggattaattcaaccacataagcaggagaacaatgatactggtcctaacgccc 422
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12076 tattaagtgg-ttaattcaaccacataagcaggagaactatgatactggtcctaacgccc 12018
Query: 423 catctactattttgagaagtaccccaccattacctgttttcaaaactgttgcttagataa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12017 catctactattttgagaagtaccccaccattacctgttttcaaaactgttgcttagataa 11958
Query: 483 aagtagcgcgaggcatactttccttctcaatgttggcattatgataaagggtcatgtatc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11957 aagtagcgcgaggcatactttccttctcaatgttggcattatgataaagggtcatgtatc 11898
Query: 543 aatacttagctactcattagtctccaacgtttgaagcaaaccagcacccgtcacatgcaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11897 aatacttagctactcattagtctccaacgtttgaagcaaaccagcacccgtcacatgcaa 11838
Query: 603 atgccattacccctcaaagagtataaccaatcagtatatttatagaaaaagtaggaggaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11837 atgccattacccctcaaagagtataaccaatcagtatatttatagaaaaagtaggaggaa 11778
Query: 663 gtagtcactattggtacaacaggctttaacaaagaaatatgtagcatgctcatctatcta 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11777 gtagtcactattggtacaacaggctttaacaaagaaatatgtagcatgctcatctatcta 11718
Query: 723 aatatgcagaacacgaaaagatgaacatcaagatgaaatgcgggcacagttacggtagaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11717 aatatgcagaacacgaaaagatgaacatcaagatgaaatgcgggcacagttacggtagaa 11658
Query: 783 taacgcttttacaaacatgtatatatcaattacgacatcattcagctcacctttattctc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11657 taacgcttttacaaacatgtatatatcaattacgacatcattcagctcacctttattctc 11598
Query: 843 aataaggatagaatgcgtatataccccagagcaaattaccagctactagtccttacaggt 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11597 aataaggatagaatgcgtatataccccagagcaaattaccagctactagtccttacaggt 11538
Query: 903 tgtttcttgtacaatggataaaaatatcgctactaccataaagcatctcacacgcgcctt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11537 tgtttcttgtacaatggataaaaatatcgctactaccataaagcatctcacacgcgcctt 11478
Query: 963 acctttytctaagagggttatgcattcatttctttccaaaagaaaagtggggaattgttt 1022
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 11477 accttt-tctaagagggttatgcattcatttctttccaaaagaaaagt-ggaaattgttt 11420
Query: 1023 agttcacacgaaacttgcctctatgaggtggctcactcccgacgtggsagt 1073
|||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 11419 agttcacacgaaacttgcctttatgaggtggctcactcccgacgtggcagt 11369
>3x_Contig1352
Length = 6660
Score = 395 bits (199), Expect = e-109
Identities = 205/207 (99%)
Strand = Plus / Plus
Query: 27 caacctgggagagaatttatcgtgaaaattatggagttaagtcttttcgccgctgactat 86
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6438 caacctgggagagaatttatcgtgaaaattatggagtcaagtcttttcgccgctgactat 6497
Query: 87 atactctgtcatttcttgctttatgcttaaacacctattgtcttgataccatttatcgat 146
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6498 atactctgtcatttcttgctttatgctcaaacacctattgtcttgataccatttatcgat 6557
Query: 147 tattggcatagtacaatgcttttctggctaagaccgggttcatttctatcgaggacgaca 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6558 tattggcatagtacaatgcttttctggctaagaccgggttcatttctatcgaggacgaca 6617
Query: 207 atatactctgcaaaacagaaaaggata 233
|||||||||||||||||||||||||||
Sbjct: 6618 atatactctgcaaaacagaaaaggata 6644
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7704
Number of Sequences: 1807
Number of extensions: 7704
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 1073
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1057
effective length of database: 10,329,639
effective search space: 10918428423
effective search space used: 10918428423
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)